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Danish Taxonomic Facility (DK-TAF)

Collections | Analytical facilities | Strengths of collections | Staff expertise

DK-TAF is a large infrastructure consisting of collections, expertise and equipment for the advanced study of biosystematics and earth sciences. DK-TAF comprises two departments of the University of Copenhagen (Table 1).

DK-TAF Partner Institutions

Department

LOCATION

Natural History Museum of Denmark (NHMD)

Copenhagen, Denmark

Institute of Biology(DB)

Copenhagen, Denmark

Mandahl-Barth Centre for Biodiversity and Health, DBL – Centre for Health Research and Development, Department of Veterinary Pathobiology

Charlottenlund , Denmark

The departments are located close to each other in north-central Copenhagen (max. distance: 3 km). There are excellent bus services between them, but many staff and visitors prefer to use a bicycle.

NHMD houses the Danish Centre for bird ringing and is a member of Geocentre Copenhagen with formal and informal contacts with the other earth science institutes in Copenhagen.

DB houses the Scandinavian Culture Centre for Algae and Protozoa.

The mollusc collections of the Mandahl-Barth Centre for Biodiversity and Health, DBL – Centre for Health Research and Development are also available through DK-TAF.

Collections & expertise
The collections of DK-TAF comprise a total of about 20 million specimens of preserved animals, preserved and living plants, tissues, fossils, minerals and rocks. Particular strengths of the collections are listed below.

The collections are physically well arranged, so desired specimens can easily be located and examined. A significant and ever-increasing part of the collections is digitised.

The tenured scientists working at DK-TAF possess expert knowledge in a vast array of zoological, botanical and geological disciplines. In many cases they are world-leading experts in their fields and/or represent unique or rare expertise in Europe. These persons will act as mentors for visiting researchers given access to DK-TAF.

Available hosts:

Natural History Museum of Denmark:
Botany: Knud Ib Christensen, Ib Friis, Ole Hamann, Hans V. Hansen, Eric Steen Hansen, Henning Knudsen, Peter Krogstrup, Ruth Nielsen, Henrik Ærenlund Pedersen, Olof Ryding.
.
Geology including Palaeontology: Gilles Cuny, Svend Funder, David Harper, Henning Haack, Erik Schou Jensen, Ole Johnsen, Arne Thorshøj Nielsen, Asger Ken Pedersen, Jan Audun Rasmussen, Minik Rosing.

Invertebrate Zoology: Danny Eibye-Jacobsen, Henrik Enghoff, Niels P. Kristensen, Reinhardt M. Kristensen, Claus Nielsen, Jørgen Olesen, Thomas Pape, Nikolaj Scharff, Aleksey Solodovnikov, Ole S. Tendal, Lars Vilhelmsen.

Vertebrate Zoology: Hans J. Baagøe, Jon Fjeldså, Peter Rask Møller, Kim Aaris-Sørensen

Molecular systematics laboratory: Gitte Petersen, Ole Seberg


Department of Biology:

Evolutionary Biology: Signe Frederiksen, Bo Johansen, Lise Bolt Jørgensen, Bo Vest Pedersen, Finn Rasmussen, Hans Siegismund

Mycology: Rasmus Kjøller,Thomas Læssøe, Søren Rosendal, Ulrik Søchting

Phycology: Niels Daugbjerg, Marianne Ellegaard, Øjvind Moestrup. Poul Møller Pedersen

Zoomorphology: Jens Høeg, Åse Jespersen, Andreas Wanninger

Mandahl-Barth Centre for Biodiversity and Health, DBL – Centre for Health Research and Development, Department of Veterinary Pathobiology :

Aslak Jørgensen, Thomas K. Kristensen

Supporting analytical facilities
The placement of national main libraries for systematic zoology, botany and geology at DK-TAF adds to the strength of the infrastructure, as does the presence of state-of-the art equipment. In particular, the new MIMER computer cluster constitutes a rare resource, which will allow analysis of very large phylogenetic data-sets, very few other institutions worldwide devoted to this kind of research can offer access to a comparable facility.

List of facilities (Excel)

 

Some particular strengths of DK-TAF collections

ca. 75,000 type specimens, including many old, very frequently requested types , e.g. ca. 8,000 types of insects described by I.C. Fabricius around year 1800, the Forsskål, Isert & Thonning plants types , and types of fossil animals and plants from Denmark and Greenland

Arctic, especially Greenlandic, and Danish animals, deep-sea animals, Baltic Sea animals, Philippine, Bismarck and Solomon Islands animals, whales and South American Quaternary mammal fossils. The world's largest databases on African terrestrial vertebrates (> 800,000 records of ca. 3,000 species) and South American birds (ca. 600,000 records of 3.100 species). Insects, particularly Lepidoptera from temperate S. America  . the new phyla Loricifera, Cycliophora and Micrognathozoa

All known species of African and Danish freshwater gastropods and bivalves (collection belonging to Mandahl-Barth Centre for Biodiversity and Health, DBL – Centre for Health Research and Development, Department of Veterinary Pathobiology, Faculty of Life Sciences, University of Copenhagen – formerly: Danish Bilharzias Laboratory)

Tissue collections for DNA analysis, esp. the world's largest collection from birds (15,000 samples representing 3,000 species), 8,000 African mammal samples and 2,000 DNA samples of Monocotyledones

Fossils from Denmark and the Baltic area, including all important fossils recently found in Denmark. Fossils from Greenland and the Arctic. Devonian Amphibians. Mo-clay Tertiary fossils, especially birds. Triassic fishes from Madagascar, Fossil fishes from the Devonian, Permian, and Triassic of Greenland.

Plants, mosses, lichens and fungi from Greenland, N Atlantic islands, Denmark, Scandinavia, E and NE Africa, Thailand

Seeds of Triticeae (wild relatives of wheat, rye and barley, more than 10,000 samples) . Culture collection of algae, particularly marine phytoplankton, in the Scandinavian Culture Centre for Algae and Protozoa (BI)

Thailand orchids, Crataegus, Commelinaceae and Begoniaceae . World's largest collection of Dahlia. World's only off-site collection of Galapagos plants. Greek mountain plants. Succulents. Very large and diverse collection of annual plants. Seed and gene bank of wild Danish plants.

Examples of unique / rare expertise represented by DK-TAF staff

ZOOLOGICAL TAXONOMIC EXPERTISE in:

Foraminifera

Xenophyophora

Polychaeta, Phyllodocidae & Spionidae

Tardigrada

Araneae Araneoidea

Crustacea Tantulocarida, Mystacocarida & Leptostraaca

Diplopoda Julida

Coleoptera Staphylinoidea

Lepidotera 'primitive groups'

Hymenoptera Orussidae

Diptera Schizomyoidea

Entoprocta

Loricifera


BOTANICAL TAXONOMIC EXPERTISE in:

Arctic/Antarctic lichens

Toxic marine microalgae

Pinaceae

Asteraceae Mutisieae

Dahlia

Calyceraceae

Orchidaceae

Crataegus

Triticean grasses

Teloschistaceae


PALAEONTOLOGICAL/GEOLOGICAL EXPERTISE in:

Porifera

Graptolithina

Trilobita

Sharks

Early life forms

Impact craters


'DISCIPLINARY' EXPERTISE in:

X-radiography analyses of animals

Identification of Chiroptera using ultrasonic electronics

Plant tissue culture methods

Computer aided plant identification